| # | Title | Rating | Length |
|---|
| 1 | Opening | | 0:54 |
| 2 | Title | | 1:25 |
| 3 | Sector 1 (SRX) SR388 Simulation Area | | 5:24 |
| 4 | Environment Sound (Silence 1) | | 0:56 |
| 5 | Environment Sound (Tension) | | 1:14 |
| 6 | Environment Sound (Shock) | | 0:28 |
| 7 | Heading to the Huge Bio-Readings | | 1:47 |
| 8 | Tension before a Confrontation | | 0:39 |
| 9 | VS. Arachnus | | 2:43 |
| 10 | X Invasion Detected | | 1:24 |
| 11 | Navigation Room | | 1:28 |
| 12 | VS. Core-X, Chozo Statue Second Form | | 1:08 |
| 13 | Environment Sound (Disquieting) | | 0:38 |
| 14 | Sector 2 (TRO) Tropical Area | | 3:07 |
| 15 | VS. Zazabi, Varia Core-X | | 1:44 |
| 16 | Environment Sound (Silence 2) | | 1:04 |
| 17 | Sector 4 (AQA) Water Level Control Area | | 4:22 |
| 18 | VS. Serris, Yakuza | 4 | 1:42 |
| 19 | Sector 3 (PYR) High Temperature Area | | 2:29 |
| 20 | VS. BOX | | 0:47 |
| 21 | Sector 6 (NOC) Dark Area | | 5:14 |
| 22 | SA-X Appears | | 0:37 |
| 23 | SA-X Chase | | 0:26 |
| 24 | Game Over | | 0:30 |
| 25 | Sector 5 (ARC) Low Temperature Area | | 1:11 |
| 26 | Sector 3 Emergency Situation | | 0:32 |
| 27 | Sector 3 Restore the Cooling Unit Timer Mission | | 5:14 |
| 28 | Environment Sound (Intrigue) | | 0:56 |
| 29 | VS. Chozo Statue First Form | | 0:47 |
| 30 | VS. Nightmare | | 1:50 |
| 31 | Sector 4 (AQA) Underwater Area | | 4:52 |
| 32 | VS. Neo Ridley | | 1:36 |
| 33 | Final Orders | | 2:18 |
| 34 | VS. SA-X | | 0:35 |
| 35 | Station Escape Timer Mission | | 0:56 |
| 36 | Epilogue | | 1:14 |
| 37 | Ending | | 3:19 |
| 38 | Appearance Jingle | | 0:06 |
| 39 | Item Obtainment Jingle | | 0:08 |
| 40 | Suit Upgrade | | 0:03 |
| 41 | Objective Complete | | 0:04 |